Miyakogusa Predicted Gene

Lj0g3v0292789.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KV74_SOYBN 463 69.4 78.4 (tr|I1KV74) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G15240.3 279 49.1 59.2 | Symbols: | Phox-associated domain;Phox-like;Sorting nexin, C-terminal | chr1:5243799-5248498 FORWARD LENGTH=1012
Medicago Medtr0147s0080.1 413 65.5 73.2 | sorting nexin carboxy-terminal protein | HC | scaffold0147:38059-27596 | 20130731
Soybean Glyma08g21950.1 461 69.4 78.4  
LJGI gnl|LJGI|TC71589 272 99.3 99.3 similar to UniRef100_A7P7B1 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0292789.2 length: 332 aa.
IPR013937 Sorting nexin, C-terminal
method AccNumber shortName E-value location
HMMPfam PF08628 Nexin_C 4.8e-25 184-319
no_ID  
HMMPanther PTHR22999 PX 8.3e-68 1-330
HMMPanther PTHR22999:SF1 UNCHARACTERIZED 8.3e-68 1-330
Seg seg seg NA 169-181
244-263
Putative transmembrane regions
  From To
TM segments
SOSUI		 310 331
Wolf-PSORT
Lj0g3v0292789.2	vacu 4, golg 4, cyto 2, plas 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0292789.2