| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7L741_SOYBN | 334 | 66.3 | 72.8 | (tr|K7L741) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G10320.1 | 219 | 68.2 | 83.3 | | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:3384164-3388373 REVERSE LENGTH=757 |
| Medicago | Medtr2g005450.1 | 319 | 62.9 | 71.9 | | zinc finger CCCH domain protein, putative | HC | chr2:162220-168024 | 20130731 |
| Soybean | Glyma08g17310.1 | 328 | 62.2 | 68.3 | |
| LJGI | --No_Hits-- |
| Lj0g3v0290279.1 | length: 281 aa. | |||
| IPR000571 | Zinc finger, CCCH-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF00642 | zf-CCCH | 1.6e-07 | 93-120 |
| HMMSmart | SM00356 | zinc | 0.00034 | 92-121 |
| ProfileScan | PS50103 | ZF_C3H1 | 10.465 | 92-122 |
| IPR009145 | U2 auxiliary factor small subunit | |||
| Molecular Function | GO:0003723 | RNA binding | ||
| Cellular Component | GO:0005634 | nucleus | ||
| FPrintScan | PR01848 | U2AUXFACTOR | 1.2e-15 | 47-69 74-98 112-124 |
| HMMPanther | PTHR12620 | U2 | 5.1e-27 | 42-266 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 4.4e-11 | 39-88 |
| no_ID | ||||
| Seg | seg | seg | NA | 176-187 |
| superfamily | SSF54928 | RNA-binding | 4.8e-08 | 39-95 |
Lj0g3v0290279.1 chlo 7, extr 3, vacu 3
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0290279.1 |