Miyakogusa Predicted Gene

Lj0g3v0286759.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T1K5_LOTJA 377 99.5 100.0 (tr|I3T1K5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G37680.1 359 92.9 98.4 | Symbols: ATARLA1A, ARLA1A | ADP-ribosylation factor-like A1A | chr5:14969797-14971098 REVERSE LENGTH=184
Medicago Medtr5g078090.1 364 96.2 98.4 | ADP-ribosylation factor-like protein A1D | HC | chr5:33353518-33348857 | 20130731
Soybean Glyma14g39540.1 365 95.7 97.8  
LJGI gnl|LJGI|GO024449 1092 99.8 99.8 similar to UniRef100_A9RFQ6 Cluster: Arl8-family small GTPase; n=1; Physcomitrella patens subsp. patens|Rep: Arl8-family small GTPase - Physcomitrella patens subsp. patens, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0286759.1 length: 184 aa.
IPR003579 Small GTPase superfamily, Rab type
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 3.3e-08 20-183
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 1.5e-19 18-174
IPR006687 Small GTPase superfamily, SAR1-type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006886 intracellular protein transport    
HMMSmart SM00178 Sar1p-like 8.2e-15 8-180
IPR006689 Small GTPase superfamily, ARF/SAR type
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00328 SAR1GTPBP 7.4e-15 21-44
77-102
122-143
HMMPfam PF00025 Arf 4.6e-45 9-178
IPR024156 Small GTPase superfamily, ARF type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00177 ARF-like 4e-28 1-184
ProfileScan PS51417 ARF 18.269 13-180
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.2e-45 17-180
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.6e-51 11-178
HMMPanther PTHR11711 ADP 2.8e-121 1-180
HMMPanther PTHR11711:SF32 PUTATIVE 2.8e-121 1-180
Wolf-PSORT
Lj0g3v0286759.1	nucl 10, chlo 2, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0286759.1