Miyakogusa Predicted Gene

Lj0g3v0284669.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S180_LOTJA 312 83.1 83.6 (tr|I3S180) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G06660.1 251 68.8 75.7 | Symbols: | Protein of unknown function DUF106, transmembrane | chr5:2046863-2047453 FORWARD LENGTH=196
Medicago Medtr7g085050.1 308 82.0 82.0 | transmembrane and coiled-coil protein | HC | chr7:32878557-32877988 | 20130731
Soybean Glyma19g28420.2 308 81.5 82.5  
LJGI gnl|LJGI|TC61004 1092 98.8 98.8 similar to UniRef100_Q4TZT9 Cluster: Fb27; n=1; Gossypium hirsutum|Rep: Fb27 - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (91%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0284669.1 length: 189 aa.
IPR002809 Protein of unknown function DUF106, transmembrane
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
HMMPfam PF01956 DUF106 1.2e-41 15-172
IPR008559 Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
Cellular Component GO:0016020 membrane    
HMMPIR PIRSF023322 Predicted 5.7e-97 1-189
HMMPanther PTHR20917 PNAS-RELATED 3.7e-87 1-188
no_ID  
Coil coil coiled-coil NA 41-62
Seg seg seg NA 64-75
97-115
Putative transmembrane regions
  From To
TM segments
SOSUI		 14 36
95 117
Wolf-PSORT
Lj0g3v0284669.1	chlo 3, nucl 3, cyto 3, cyto_nucl 3, plas 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0284669.1 Not targeted -50.441 -14.431 -1.902 75.23% -34.108