Miyakogusa Predicted Gene

Lj0g3v0282509.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MS87_SOYBN 695 81.7 85.8 (tr|I1MS87) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G17370.1 541 67.0 75.9 | Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=419
Medicago Medtr4g124940.1 619 74.3 80.1 | nucleolysin TIAR-like protein | HC | chr4:51822192-51817182 | 20130731
Soybean Glyma17g05530.3 695 81.7 85.8  
LJGI gnl|LJGI|TC63004 1402 100.0 100.0 similar to UniRef100_A7PDT2 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0282509.1 length: 416 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 2.2e-12 48-114
133-203
253-319
HMMSmart SM00360 RNA 7.3e-19 47-116
132-205
252-321
ProfileScan PS50102 RRM 15.068 46-120
131-209
251-325
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2e-20 46-125
126-211
235-327
no_ID  
HMMPanther PTHR24012 FAMILY 3e-152 1-416
HMMPanther PTHR24012:SF31 SUBFAMILY 3e-152 1-416
Seg seg seg NA 326-349
383-398
superfamily SSF54928 RNA-binding 3.7e-21 45-216
214-322
Wolf-PSORT
Lj0g3v0282509.1	nucl 8, chlo 4, cyto_nucl 4, cysk_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0282509.1