Miyakogusa Predicted Gene
- Lj0g3v0277749.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LZ56_SOYBN |
150 |
83.7 |
89.5 |
(tr|K7LZ56) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G26670.1 |
92.8 |
53.2 |
66.0 |
| Symbols: | Pectinacetylesterase family protein | chr5:9318456-9320816 FORWARD LENGTH=416 |
| Medicago |
Medtr4g124320.1 |
124 |
71.9 |
79.8 |
| pectinacetylesterase family protein | HC | chr4:51346077-51341085 | 20130731 |
| Soybean |
Glyma13g17740.1 |
150 |
83.7 |
89.5 |
|
| LJGI |
gnl|LJGI|TC68833 |
387 |
94.5 |
94.5 |
similar to UniRef100_A7PRH0 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0277749.1 |
length: 85 aa. |
| IPR004963 |
Pectinacetylesterase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR21562 |
NOTUM-RELATED |
1.4e-25 |
4-83 |
| HMMPfam |
PF03283 |
PAE |
2.4e-18 |
38-83 |
| no_ID |
|
| HMMPanther |
PTHR21562:SF1 |
PECTIN |
1.4e-25 |
4-83 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
23 |
| 27 |
49 |
- Wolf-PSORT
Lj0g3v0277749.1 extr 5, chlo 4, cyto 2, nucl 1, mito 1, E.R. 1, cyto_pero 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0277749.1 |
|