Miyakogusa Predicted Gene
- Lj0g3v0277199.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KDZ9_SOYBN |
295 |
74.2 |
84.5 |
(tr|I1KDZ9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G52900.1 |
199 |
59.5 |
77.2 |
| Symbols: | Toll-Interleukin-Resistance (TIR) domain family protein | chr1:19702211-19702916 REVERSE LENGTH=199 |
| Medicago |
Medtr2g079950.1 |
247 |
66.5 |
84.1 |
| toll-interleukin-resistance (TIR) domain protein | HC | chr2:33703925-33704889 | 20130731 |
| Soybean |
Glyma06g38390.1 |
295 |
74.2 |
84.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0277199.1 |
length: 197 aa. |
| IPR000157 |
Toll/interleukin-1 receptor homology (TIR) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Biological Process |
GO:0007165 |
signal transduction |
|
|
| HMMPfam |
PF13676 |
TIR_2 |
2.2e-19 |
34-125 |
| HMMSmart |
SM00255 |
Toll |
1.1e-14 |
31-159 |
| ProfileScan |
PS50104 |
TIR |
13.423 |
30-145 |
| superfamily |
SSF52200 |
Toll/Interleukin |
4e-23 |
33-158 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.10140 |
no description |
1.7e-12 |
32-129 |
| HMMPanther |
PTHR31008 |
COP1-INTERACTING |
1.4e-52 |
31-188 |
- Wolf-PSORT
Lj0g3v0277199.1 chlo 7, mito 3.5, nucl 3, cyto_mito 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0277199.1 |
|