Miyakogusa Predicted Gene

Lj0g3v0275819.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SST4_LOTJA 336 99.4 99.4 (tr|I3SST4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G42390.1 188 68.8 83.2 | Symbols: | protein kinase C substrate, heavy chain-related | chr2:17651381-17652509 REVERSE LENGTH=212
Medicago Medtr4g079430.2 250 75.7 81.7 | glucosidase II beta subunit-like protein | HC | chr4:30708724-30710878 | 20130731
Soybean Glyma12g14110.1 242 75.5 81.1  
LJGI gnl|LJGI|GO023614 989 96.5 96.5 similar to UniRef100_A7PJC8 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (59%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0275819.1 length: 196 aa.
IPR002172 Low-density lipoprotein (LDL) receptor class A repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
superfamily SSF57424 LDL 0.0052 76-133
31-75
no_ID  
HMMPanther PTHR12630 N-LINKED 7.7e-49 27-129
HMMPfam PF12999 PRKCSH-like 2e-31 26-127
Seg seg seg NA 165-196
Putative transmembrane regions
  From To
TM segments
SOSUI		 8 30
163 185
Wolf-PSORT
Lj0g3v0275819.1	nucl 5, cyto 3, mito 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0275819.1