Miyakogusa Predicted Gene

Lj0g3v0274949.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1MZ82_SOYBN 128 48.4 50.3 (tr|I1MZ82) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT3G55646.1 57.4 31.4 37.8 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:20645087-20646148 FORWARD LENGTH=146

Medicago Medtr3g069570.1 92.0 42.0 46.5 | hypothetical protein | HC | chr3:31118242-31121359 | 20130731

Soybean Glyma11g34650.1 127 47.8 50.3

LJGI gnl|LJGI|TC76933 105 83.7 83.7 similar to UniRef100_A7PIJ8 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0274949.1 length: 154 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 11-19
33-42
74-89
98-106
126-141

Wolf-PSORT

Lj0g3v0274949.1 nucl 11, cyto 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0274949.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1MZ82_SOYBN	128	48.4	50.3	(tr\|I1MZ82) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT3G55646.1	57.4	31.4	37.8	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). \| chr3:20645087-20646148 FORWARD LENGTH=146
Medicago	Medtr3g069570.1	92.0	42.0	46.5	\| hypothetical protein \| HC \| chr3:31118242-31121359 \| 20130731
Soybean	Glyma11g34650.1	127	47.8	50.3
LJGI	gnl\|LJGI\|TC76933	105	83.7	83.7	similar to UniRef100_A7PIJ8 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)

no_ID
Lj0g3v0274949.1				length: 154 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	11-19 33-42 74-89 98-106 126-141