Miyakogusa Predicted Gene
- Lj0g3v0263999.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B0BLA7_LOTJA |
151 |
70.2 |
76.3 |
(tr|B0BLA7) CM0545.370.nc protein OS=Lotus japonicus GN=CM0545.370.nc PE=3 SV=1 |
| TAIR_pep |
AT5G55140.1 |
97.4 |
43.2 |
64.0 |
| Symbols: | ribosomal protein L30 family protein | chr5:22381370-22381787 FORWARD LENGTH=109 |
| Medicago |
Medtr8g099150.2 |
142 |
66.4 |
78.5 |
| 50S ribosomal L30-like protein | HC | chr8:41687399-41684763 | 20130731 |
| Soybean |
Glyma14g05160.2 |
140 |
65.2 |
73.0 |
|
| LJGI |
gnl|LJGI|GO040366 |
242 |
90.7 |
90.7 |
weakly similar to UniRef100_Q6ZC61 Cluster: Ribosomal protein L30p family-like; n=1; Oryza sativa Japonica Group|Rep: Ribosomal protein L30p family-like - Oryza sativa subsp. japonica (Rice), partial (84%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0263999.1 |
length: 110 aa. |
| IPR005996 |
Ribosomal protein L30, bacterial-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003735 |
structural constituent of ribosome |
|
|
| Biological Process |
GO:0006412 |
translation |
|
|
| Cellular Component |
GO:0015934 |
large ribosomal subunit |
|
|
| HMMTigr |
TIGR01308 |
rpmD_bact: |
1.1e-15 |
19-66 |
| IPR016082 |
Ribosomal protein L30, ferredoxin-like fold domain |
| Gene3D |
G3DSA:3.30.1390.20 |
no description |
3e-11 |
18-65 |
| HMMPfam |
PF00327 |
Ribosomal_L30 |
2.4e-15 |
19-65 |
| superfamily |
SSF55129 |
Ribosomal |
6.8e-11 |
16-65 |
- Wolf-PSORT
Lj0g3v0263999.1 mito 7, chlo 3, nucl 2, plas 1, cysk 1, cyto_nucl 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0263999.1 |
|