Miyakogusa Predicted Gene

Lj0g3v0262839.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KML7_SOYBN 605 73.8 80.5 (tr|I1KML7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G26850.1 410 60.8 77.1 | Symbols: | F-box family protein | chr2:11449369-11450889 REVERSE LENGTH=371
Medicago Medtr5g089110.1 541 66.3 75.7 | F-box plant-like protein | HC | chr5:38730456-38725757 | 20130731
Soybean Glyma07g36360.1 605 73.8 80.5  
LJGI gnl|LJGI|TC74282 2159 99.8 99.8 similar to UniRef100_A7PFU7 Cluster: Chromosome chr6 scaffold_15, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_15, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0262839.1 length: 397 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 3e-08 87-130
HMMSmart SM00256 A 8.4e-06 90-130
ProfileScan PS50181 FBOX 11.061 84-130
superfamily SSF81383 F-box 2e-11 87-357
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 8.3e-08 83-130
HMMPanther PTHR31482 FAMILY 2.6e-181 76-397
HMMPanther PTHR31482:SF0 SUBFAMILY 2.6e-181 76-397
Seg seg seg NA 9-25
61-73
377-386
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
Wolf-PSORT
Lj0g3v0262839.1	extr 8, vacu 3, chlo 1, plas 1, golg 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0262839.1