Miyakogusa Predicted Gene

Lj0g3v0258789.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M4L7_SOYBN 1485 85.8 89.0 (tr|I1M4L7) Beta-galactosidase OS=Glycine max PE=3 SV=1
TAIR_pep AT2G28470.1 1216 71.3 80.1 | Symbols: BGAL8 | beta-galactosidase 8 | chr2:12169047-12173164 REVERSE LENGTH=852
Medicago Medtr2g094060.1 1453 83.5 88.5 | beta-galactosidase-like protein | HC | chr2:40076600-40083149 | 20130731
Soybean Glyma13g40200.1 1485 85.8 89.0  
LJGI gnl|LJGI|TC62323 1594 99.0 99.0 similar to UniRef100_Q5CCP7 Cluster: Beta-galactosidase; n=1; Pyrus pyrifolia|Rep: Beta-galactosidase - Pyrus pyrifolia (Japanese pear) (Pyrus serotina), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0258789.1 length: 839 aa.
IPR000922 D-galactoside/L-rhamnose binding SUEL lectin domain
method AccNumber shortName E-value location
Molecular Function GO:0030246 carbohydrate binding    
HMMPfam PF02140 Gal_Lectin 1.2e-19 761-838
ProfileScan PS50228 SUEL_LECTIN 16.324 753-839
IPR001944 Glycoside hydrolase, family 35
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00742 GLHYDRLASE35 3.8e-80 36-53
57-75
112-131
169-184
248-263
285-300
305-321
615-629
642-658
HMMPanther PTHR23421 BETA-GALACTOSIDASE 0 6-749
HMMPfam PF01301 Glyco_hydro_35 3.9e-119 33-337
IPR006104 Glycoside hydrolase, family 2, N-terminal
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF02837 Glyco_hydro_2_N 7.1e-05 466-568
IPR008979 Galactose-binding domain-like
Gene3D G3DSA:2.60.120.260 no description 1.1e-10 427-543
616-725
superfamily SSF49785 Galactose-binding 2.3e-24 583-752
399-573
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 1.5e-126 25-342
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 1.1e-107 21-342
IPR019801 Glycoside hydrolase, family 35, conserved site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS01182 GLYCOSYL_HYDROL_F35 NA 171-183
no_ID  
HMMPanther PTHR23421:SF2 BETA-GALACTOSIDASE 0 6-749
Seg seg seg NA 432-447
589-603
806-818
Putative transmembrane regions
  From To
TM segments
SOSUI		 4 25
97 119
Wolf-PSORT
Lj0g3v0258789.1	chlo 5, nucl 2, cyto 2, vacu 2, E.R. 2, cyto_nucl 2, E.R._vacu 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0258789.1