Miyakogusa Predicted Gene

Lj0g3v0258229.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SUR7_LOTJA 556 92.5 92.5 (tr|I3SUR7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G40830.3 303 55.1 66.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:17043642-17044628 FORWARD LENGTH=328
Medicago Medtr1g051105.2 299 54.3 66.9 | zinc finger, C3HC4 type (RING finger) protein | HC | chr1:19922958-19919998 | 20130731
Soybean Glyma02g22760.1 444 73.5 80.6  
LJGI gnl|LJGI|TC63473 1128 99.2 99.2  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0258229.1 length: 293 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 5.4e-14 185-229
HMMSmart SM00184 Ring 5.9e-07 186-226
ProfileScan PS50089 ZF_RING_2 12.106 186-227
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.8e-17 182-230
no_ID  
HMMPanther PTHR22763 RING 2.4e-51 1-279
HMMPanther PTHR22763:SF0 SUBFAMILY 2.4e-51 1-279
HMMPfam PF14369 zf-RING_3 3.8e-09 6-37
Seg seg seg NA 236-257
superfamily SSF57850 RING/U-box 2.2e-22 160-233
Wolf-PSORT
Lj0g3v0258229.1	nucl 10.5, cyto_nucl 6, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0258229.1