Miyakogusa Predicted Gene

Lj0g3v0257719.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LYE7_SOYBN 197 53.8 71.6 (tr|K7LYE7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G07930.3 172 50.0 68.5 | Symbols: | DNA glycosylase superfamily protein | chr3:2526720-2528416 FORWARD LENGTH=445
Medicago Medtr0037s0250.2 171 53.3 69.1 | base excision DNA repair protein, HhH-GPD family protein | HC | scaffold0037:102615-107252 | 20130731
Soybean Glyma13g11620.1 195 52.5 69.1  
LJGI gnl|LJGI|TC58046 79.8 90.6 90.6 similar to UniRef100_A7R238 Cluster: Chromosome undetermined scaffold_397, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_397, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0257719.1 length: 207 aa.
IPR003265 HhH-GPD domain
method AccNumber shortName E-value location
Biological Process GO:0006284 base-excision repair    
HMMPfam PF00730 HhH-GPD 8.9e-06 89-202
IPR011257 DNA glycosylase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0006281 DNA repair    
Gene3D G3DSA:1.10.340.30 no description 3.1e-32 58-199
superfamily SSF48150 DNA-glycosylase 2.2e-18 62-207
no_ID  
HMMPanther PTHR15074 5-METHYLCYTOSINE 8.2e-27 48-200
HMMPanther PTHR15074:SF0 SUBFAMILY 8.2e-27 48-200
Seg seg seg NA 8-25
Wolf-PSORT
Lj0g3v0257719.1	cyto 9, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0257719.1