Miyakogusa Predicted Gene

Lj0g3v0256079.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JGN6_SOYBN 316 65.1 73.9 (tr|I1JGN6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G58003.1 256 52.7 67.8 | Symbols: CPL4 | C-terminal domain phosphatase-like 4 | chr5:23480066-23481924 FORWARD LENGTH=440
Medicago Medtr4g121140.1 312 63.1 73.8 | carboxy-terminal domain phosphatase-like protein | HC | chr4:50177925-50171180 | 20130731
Soybean Glyma02g36420.2 316 65.1 73.9  
LJGI gnl|LJGI|TC72817 240 82.2 82.2 similar to UniRef100_Q9FJL6 Cluster: Gb|AAD25584.1; n=2; Arabidopsis thaliana|Rep: Gb|AAD25584.1 - Arabidopsis thaliana (Mouse-ear cress), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0256079.1 length: 260 aa.
IPR004274 NLI interacting factor
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF03031 NIF 5.1e-29 72-217
HMMSmart SM00577 catalytic 1.1e-53 69-219
ProfileScan PS50969 FCP1 31.358 66-232
IPR011947 FCP1-like phosphatase, phosphatase domain
Molecular Function GO:0004721 phosphoprotein phosphatase activity    
Cellular Component GO:0005634 nucleus    
HMMTigr TIGR02250 FCP1_euk: 1.9e-51 68-215
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 2.9e-35 61-254
superfamily SSF56784 HAD-like 5.4e-32 68-245
no_ID  
HMMPanther PTHR23081 RNA 2.1e-74 13-260
Seg seg seg NA 71-82
Putative transmembrane regions
  From To
TM segments
SOSUI		 239 259
Wolf-PSORT
Lj0g3v0256079.1	nucl 6, cyto 3.5, cysk_nucl 3.5, nucl_plas 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0256079.1