Miyakogusa Predicted Gene

Lj0g3v0254499.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5C1C7_VITVI 293 75.3 83.3 (tr|A5C1C7) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044067 PE=4 SV=1
TAIR_pep AT1G75560.2 173 55.5 67.1 | Symbols: | zinc knuckle (CCHC-type) family protein | chr1:28371420-28372717 REVERSE LENGTH=257
Medicago --No_Hits--        
Soybean Glyma04g01070.2 279 84.1 85.3  
LJGI gnl|LJGI|TC58333 561 100.0 100.0 similar to UniRef100_A7P7X8 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0254499.1 length: 170 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.60.10 no description 2.4e-08 11-44
45-63
64-82
83-126
127-156
HMMPfam PF00098 zf-CCHC 6.7e-06 10-25
36-52
55-71
74-90
140-156
HMMSmart SM00343 zinc 0.001 10-26
36-52
55-71
74-90
120-136
140-156
ProfileScan PS50158 ZF_CCHC 9.834 11-24
56-71
75-90
141-156
superfamily SSF57756 Retrovirus 3.1e-08 107-161
56-95
11-54
no_ID  
HMMPanther PTHR23002 ZINC 1.4e-25 10-165
Seg seg seg NA 100-115
Wolf-PSORT
Lj0g3v0254499.1	cyto 6, nucl 3, mito 3, cyto_pero 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0254499.1