Miyakogusa Predicted Gene
- Lj0g3v0253989.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LDU7_MEDTR |
635 |
93.5 |
98.4 |
(tr|G7LDU7) Phospholipid-transporting ATPase OS=Medicago truncatula GN=MTR_8g062150 PE=4 SV=1 |
| TAIR_pep |
AT1G59820.1 |
588 |
86.0 |
95.6 |
| Symbols: ALA3 | aminophospholipid ATPase 3 | chr1:22011599-22020023 FORWARD LENGTH=1213 |
| Medicago |
Medtr5g037210.1 |
606 |
89.7 |
95.3 |
| phospholipid-transporting ATPase-like protein | HC | chr5:16253375-16235616 | 20130731 |
| Soybean |
Glyma18g16990.1 |
635 |
94.7 |
98.4 |
|
| LJGI |
gnl|LJGI|DC593717 |
599 |
88.1 |
88.1 |
similar to UniRef100_A7QX90 Cluster: Chromosome undetermined scaffold_215, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_215, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0253989.2 |
length: 321 aa. |
| IPR006539 |
Phospholipid-transporting P-type ATPase, subfamily IV |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0000287 |
magnesium ion binding |
|
|
| Molecular Function |
GO:0004012 |
phospholipid-translocating ATPase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0015914 |
phospholipid transport |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPanther |
PTHR24092 |
FAMILY |
5.8e-172 |
16-321 |
| HMMTigr |
TIGR01652 |
ATPase-Plipid: |
4.9e-138 |
10-321 |
| IPR023214 |
HAD-like domain |
| Gene3D |
G3DSA:3.40.50.1000 |
no description |
1.7e-36 |
269-319 |
| superfamily |
SSF56784 |
HAD-like |
4.9e-29 |
122-319 |
| IPR023299 |
P-type ATPase, cytoplasmic domain N |
| Gene3D |
G3DSA:3.40.1110.10 |
no description |
2.5e-27 |
16-140 |
| superfamily |
SSF81660 |
Metal |
2.6e-18 |
20-142 |
| no_ID |
|
| HMMPanther |
PTHR24092:SF8 |
SUBFAMILY |
5.8e-172 |
16-321 |
| HMMPfam |
PF12710 |
HAD |
2.7e-10 |
73-311 |
| HMMPfam |
PF13246 |
Hydrolase_like2 |
2e-09 |
14-60 |
- Wolf-PSORT
Lj0g3v0253989.2 cyto 7, chlo 2, nucl 2, mito 1, vacu 1, cysk 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0253989.2 |
|