Miyakogusa Predicted Gene

Lj0g3v0244099.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SMX1_LOTJA 305 86.8 86.8 (tr|I3SMX1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G39220.1 241 67.8 77.0 | Symbols: ATRER1A | Rer1 family protein | chr4:18264280-18265531 FORWARD LENGTH=191
Medicago Medtr4g070400.1 259 75.0 80.7 | ATRER1A | HC | chr4:26526416-26523268 | 20130731
Soybean Glyma06g01400.1 257 79.4 84.4  
LJGI gnl|LJGI|TC75451 1160 100.0 100.0 similar to UniRef100_A7P8Y5 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0244099.1 length: 194 aa.
IPR004932 Retrieval of early ER protein Rer1
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPIR PIRSF016013 Endoplasmic 4.4e-127 1-190
HMMPanther PTHR10743 PROTEIN 1.4e-115 1-192
HMMPfam PF03248 Rer1 4e-72 16-181
no_ID  
Seg seg seg NA 7-13
66-80
175-191
Putative transmembrane regions
  From To
TM segments
SOSUI		 39 61
65 87
129 151
Wolf-PSORT
Lj0g3v0244099.1	vacu 6, E.R. 3, plas 2, golg 2, golg_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0244099.1