Miyakogusa Predicted Gene

Lj0g3v0220359.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M4R4_SOYBN 773 80.7 88.8 (tr|I1M4R4) 3-ketoacyl-CoA synthase OS=Glycine max PE=3 SV=1
TAIR_pep AT2G28630.1 656 68.4 82.9 | Symbols: KCS12 | 3-ketoacyl-CoA synthase 12 | chr2:12275719-12277149 REVERSE LENGTH=476
Medicago Medtr4g062270.1 752 74.7 87.5 | 3-ketoacyl-CoA synthase-like protein | HC | chr4:23110022-23111830 | 20130731
Soybean Glyma13g40670.1 773 80.7 88.8  
LJGI gnl|LJGI|TC64606 2805 99.9 99.9 similar to UniRef100_A9XU45 Cluster: 3-ketoacyl-CoA synthase 3; n=1; Gossypium hirsutum|Rep: 3-ketoacyl-CoA synthase 3 - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (89%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0220359.1 length: 472 aa.
IPR012392 Very-long-chain 3-ketoacyl-CoA synthase
method AccNumber shortName E-value location
Biological Process GO:0006633 fatty acid biosynthetic process    
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPIR PIRSF036417 Very-long-chain 6.5e-177 1-452
IPR013601 FAE1/Type III polyketide synthase-like protein
Biological Process GO:0006633 fatty acid biosynthetic process    
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPfam PF08392 FAE1_CUT1_RppA 3.3e-111 25-312
IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal
Biological Process GO:0008610 lipid biosynthetic process    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPfam PF08541 ACP_syn_III_C 5.2e-13 340-422
IPR016038 Thiolase-like, subgroup
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.47.10 no description 8.4e-48 25-230
333-425
IPR016039 Thiolase-like
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF53901 Thiolase-like 4.1e-34 15-237
239-427
no_ID  
HMMPanther PTHR31561 FAMILY 7.2e-214 1-461
Putative transmembrane regions
  From To
TM segments
SOSUI		 2 24
Wolf-PSORT
Lj0g3v0220359.1	E.R. 4.5, E.R._plas 4, cyto 3, plas 2.5, chlo 1, nucl 1, mito 1, extr 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0220359.1