Miyakogusa Predicted Gene

Lj0g3v0219829.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JZ72_SOYBN 375 78.1 85.5 (tr|I1JZ72) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G21880.2 305 69.1 83.1 | Symbols: LYM1 | lysm domain GPI-anchored protein 1 precursor | chr1:7680689-7682526 FORWARD LENGTH=416
Medicago Medtr3g072410.1 356 82.1 90.8 | LysM domain GPI-anchored protein | HC | chr3:32553629-32557165 | 20130731
Soybean Glyma04g42930.1 375 78.1 85.5  
LJGI gnl|LJGI|BW624826 204 100.0 100.0 similar to UniRef100_A7NVC3 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0219829.1 length: 289 aa.
IPR002482 Peptidoglycan-binding Lysin subgroup
method AccNumber shortName E-value location
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMSmart SM00257 Lysin 0.001 44-87
IPR018392 Peptidoglycan-binding lysin domain
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMPfam PF01476 LysM 6.3e-05 45-87
no_ID  
Gene3D G3DSA:3.10.350.10 no description 6.2e-08 44-87
Seg seg seg NA 216-234
250-264
268-289
superfamily SSF54106 LysM 6.9e-08 42-89
Putative transmembrane regions
  From To
TM segments
SOSUI		 12 34
266 287
Wolf-PSORT
Lj0g3v0219829.1	E.R._plas 4, plas 3.5, E.R. 3.5, mito 2, golg 2, chlo 1, cyto 1, extr 1, cyto_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0219829.1