Miyakogusa Predicted Gene

Lj0g3v0219689.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J373_MEDTR 892 79.9 87.2 (tr|G7J373) Glucan 1,3-beta-glucosidase OS=Medicago truncatula GN=MTR_3g086750 PE=4 SV=1
TAIR_pep --No_Hits--        
Medicago Medtr3g086750.1 892 79.9 87.2 | glycoside hydrolase family 5 protein | HC | chr3:39314035-39309363 | 20130731
Soybean Glyma18g01780.1 765 75.4 79.3  
LJGI gnl|LJGI|FS345655 1116 99.8 99.8 similar to UniRef100_A7R0H5 Cluster: Chromosome undetermined scaffold_309, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_309, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0219689.2 length: 533 aa.
IPR001547 Glycoside hydrolase, family 5
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00150 Cellulase 5.1e-27 226-488
IPR008999 Actin cross-linking
superfamily SSF50405 Actin-crosslinking 1.2e-24 66-196
IPR010431 Fascin
Molecular Function GO:0030674 protein binding, bridging    
Molecular Function GO:0051015 actin filament binding    
HMMPanther PTHR10551 FASCIN 4.3e-166 33-509
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 5.7e-124 201-504
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 2.3e-79 27-519
IPR018087 Glycoside hydrolase, family 5, conserved site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS00659 GLYCOSYL_HYDROL_F5 NA 336-345
IPR022768 Fascin domain
Molecular Function GO:0030674 protein binding, bridging    
Molecular Function GO:0051015 actin filament binding    
HMMPfam PF06268 Fascin 3.3e-05 87-181
no_ID  
Gene3D G3DSA:2.80.10.50 no description 1e-19 70-179
HMMPanther PTHR10551:SF6 OS10G0370800 4.3e-166 33-509
Seg seg seg NA 131-144
253-259
Putative transmembrane regions
  From To
TM segments
SOSUI		 4 26
36 58
511 532
Wolf-PSORT
Lj0g3v0219689.2	plas 6.5, golg_plas 5.5, golg 3.5, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0219689.2