Miyakogusa Predicted Gene

Lj0g3v0213739.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JKN6_MEDTR 978 54.1 67.6 (tr|G7JKN6) Tir-nbs-lrr resistance protein OS=Medicago truncatula GN=MTR_4g014340 PE=4 SV=1
TAIR_pep AT5G41750.2 433 34.7 50.4 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:16694047-16697527 FORWARD LENGTH=1068
Medicago Medtr4g014340.1 977 54.1 67.6 | disease resistance protein (TIR-NBS-LRR class), putative | LC | chr4:4028005-4022355 | 20130731
Soybean Glyma03g05730.1 890 53.1 66.5  
LJGI gnl|LJGI|TC70355 1505 100.0 100.0 weakly similar to UniRef100_A7PQ15 Cluster: Chromosome chr18 scaffold_24, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_24, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0213739.1 length: 1129 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 1.6e-35 12-141
HMMSmart SM00255 Toll 6.4e-46 9-146
ProfileScan PS50104 TIR 24.467 8-146
superfamily SSF52200 Toll/Interleukin 1.4e-38 2-149
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 5.1e-22 206-221
281-295
374-388
755-771
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 7e-42 194-453
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9.7e-25 166-411
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 6.9e-20 9-124
Gene3D G3DSA:3.40.50.300 no description 1.6e-08 200-350
Gene3D G3DSA:3.80.10.10 no description 5.6e-19 542-794
HMMPanther PTHR11017 LEUCINE-RICH 1.1e-205 1-824
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.1e-205 1-824
Seg seg seg NA 287-300
375-394
685-704
1065-1082
superfamily SSF46785 "Winged 5.8e-15 409-519
superfamily SSF52058 L 2.8e-29 493-835
Wolf-PSORT
Lj0g3v0213739.1	nucl 5, cyto 5, cyto_nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0213739.1