Miyakogusa Predicted Gene

Lj0g3v0212479.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JLU8_SOYBN 870 96.3 96.5 (tr|I1JLU8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G23860.2 858 94.4 96.3 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449
Medicago Medtr1g101130.1 860 94.7 96.3 | tubulin beta-1 chain | HC | chr1:45455016-45451967 | 20130731
Soybean Glyma03g15020.1 870 96.3 96.5  
LJGI gnl|LJGI|TC62547 2091 100.0 100.0 homologue to UniRef100_P37392 Cluster: Tubulin beta-1 chain; n=1; Lupinus albus|Rep: Tubulin beta-1 chain - Lupinus albus (White lupin), partial (79%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0212479.1 length: 445 aa.
IPR000217 Tubulin
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005874 microtubule    
Biological Process GO:0007017 microtubule-based process    
FPrintScan PR01161 TUBULIN 2.8e-105 10-30
51-70
93-104
106-130
132-150
151-172
176-189
190-210
370-398
HMMPanther PTHR11588 TUBULIN 0 1-445
IPR002453 Beta tubulin
Molecular Function GO:0005200 structural constituent of cytoskeleton    
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005874 microtubule    
FPrintScan PR01163 BETATUBULIN 5.1e-121 41-58
88-99
108-126
152-164
212-224
230-239
245-258
265-281
311-329
329-343
347-370
377-388
412-430
IPR003008 Tubulin/FtsZ, GTPase domain
Cellular Component GO:0043234 protein complex    
Biological Process GO:0051258 protein polymerization    
Gene3D G3DSA:3.40.50.1440 no description 1.7e-145 1-263
HMMPfam PF00091 Tubulin 4.6e-71 3-222
HMMSmart SM00864 Tubulin/FtsZ 5.9e-70 47-244
superfamily SSF52490 Tubulin 2.9e-102 1-243
IPR008280 Tubulin/FtsZ, C-terminal
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Cellular Component GO:0043234 protein complex    
Biological Process GO:0051258 protein polymerization    
superfamily SSF55307 Tubulin 1.7e-79 244-430
IPR013838 Beta tubulin, autoregulation binding site
PatternScan PS00228 TUBULIN_B_AUTOREG NA 1-4
IPR017975 Tubulin, conserved site
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005874 microtubule    
Biological Process GO:0007017 microtubule-based process    
PatternScan PS00227 TUBULIN NA 140-146
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Cellular Component GO:0043234 protein complex    
Biological Process GO:0051258 protein polymerization    
Gene3D G3DSA:3.30.1330.20 no description 1e-49 264-373
HMMPfam PF03953 Tubulin_C 3e-48 261-382
HMMSmart SM00865 Tubulin/FtsZ 3.2e-42 246-383
IPR023123 Tubulin, C-terminal
Gene3D G3DSA:1.10.287.600 no description 1.3e-34 374-430
no_ID  
Coil coil coiled-coil NA 408-446
Seg seg seg NA 138-151
431-445
Wolf-PSORT
Lj0g3v0212479.1	nucl 9, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0212479.1