Miyakogusa Predicted Gene

Lj0g3v0205459.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K2B7_MEDTR 684 81.6 85.7 (tr|G7K2B7) Chloride channel protein CLC-d OS=Medicago truncatula GN=MTR_5g005990 PE=4 SV=1
TAIR_pep AT5G26240.1 602 74.9 81.0 | Symbols: CLC-D, ATCLC-D | chloride channel D | chr5:9189622-9194347 FORWARD LENGTH=792
Medicago Medtr5g005990.1 684 81.6 85.7 | chloride channel protein ClC-D protein, putative | HC | chr5:705817-717225 | 20130731
Soybean Glyma01g44950.1 682 83.2 86.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0205459.1 length: 412 aa.
IPR001807 Chloride channel, voltage gated
method AccNumber shortName E-value location
Molecular Function GO:0005247 voltage-gated chloride channel activity    
Biological Process GO:0006821 chloride transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
FPrintScan PR00762 CLCHANNEL 5.4e-29 145-162
176-195
240-259
HMMPfam PF00654 Voltage_CLC 4.6e-61 133-380
IPR002251 Chloride channel ClC-plant
Molecular Function GO:0005247 voltage-gated chloride channel activity    
Biological Process GO:0006821 chloride transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR01120 CLCHANNELPLT 1.8e-10 51-59
261-269
275-285
293-300
IPR014743 Chloride channel, core
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0055085 transmembrane transport    
Gene3D G3DSA:1.10.3080.10 no description 5.5e-86 73-383
superfamily SSF81340 Clc 5.2e-65 54-383
no_ID  
HMMPanther PTHR11689 CHLORIDE 4.5e-209 7-411
HMMPanther PTHR11689:SF11 CHLORIDE 4.5e-209 7-411
Seg seg seg NA 28-42
235-254
325-337
Putative transmembrane regions
  From To
TM segments
SOSUI		 67 89
122 144
164 186
237 259
268 290
321 343
361 382
Wolf-PSORT
Lj0g3v0205459.1	plas 6.5, E.R. 5, cyto_plas 4, mito 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0205459.1