Miyakogusa Predicted Gene

Lj0g3v0200679.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M0H1_SOYBN 581 81.4 88.5 (tr|I1M0H1) Pectinesterase OS=Glycine max PE=3 SV=1
TAIR_pep AT3G10710.1 479 69.3 84.6 | Symbols: RHS12 | root hair specific 12 | chr3:3352289-3354237 FORWARD LENGTH=561
Medicago Medtr8g042900.1 578 81.1 88.0 | pectinesterase/pectinesterase inhibitor | HC | chr8:16603964-16606634 | 20130731
Soybean Glyma13g25560.1 581 81.4 88.5  
LJGI gnl|LJGI|BF177669 620 99.7 99.7 similar to UniRef100_A7QAI2 Cluster: Chromosome undetermined scaffold_71, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_71, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0200679.1 length: 338 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 1.2e-140 32-324
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 4.1e-104 25-338
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 1.5e-115 29-336
IPR018040 Pectinesterase, active site
PatternScan PS00503 PECTINESTERASE_2 NA 176-185
no_ID  
HMMPanther PTHR31707 FAMILY 7.3e-203 8-338
HMMPanther PTHR31707:SF0 SUBFAMILY 7.3e-203 8-338
Seg seg seg NA 17-32
Wolf-PSORT
Lj0g3v0200679.1	nucl 9, chlo 2, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0200679.1