Miyakogusa Predicted Gene

Lj0g3v0190239.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M2Y2_SOYBN 957 83.3 86.7 (tr|K7M2Y2) Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=1
TAIR_pep AT5G22030.1 687 58.3 69.5 | Symbols: UBP8 | ubiquitin-specific protease 8 | chr5:7290155-7296344 REVERSE LENGTH=913
Medicago Medtr2g087710.1 915 80.9 86.3 | ubiquitin carboxyl-terminal hydrolase | HC | chr2:36896258-36906346 | 20130731
Soybean Glyma12g31660.1 551 87.0 89.3  
LJGI gnl|LJGI|TC63796 1356 100.0 100.0 similar to UniRef100_Q9C585 Cluster: Ubiquitin carboxyl-terminal hydrolase 8; n=2; Arabidopsis thaliana|Rep: Ubiquitin carboxyl-terminal hydrolase 8 - Arabidopsis thaliana (Mouse-ear cress), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0190239.1 length: 570 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 1.5e-46 281-452
ProfileScan PS50235 UCH_2_3 17.539 283-570
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 284-299
no_ID  
HMMPanther PTHR24006 FAMILY 2.5e-152 27-563
HMMPanther PTHR24006:SF24 SUBFAMILY 2.5e-152 27-563
Seg seg seg NA 278-291
superfamily SSF54001 Cysteine 3.2e-50 279-463
Wolf-PSORT
Lj0g3v0190239.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0190239.1