Miyakogusa Predicted Gene

Lj0g3v0186219.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KPF0_SOYBN 801 74.1 82.3 (tr|K7KPF0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G37510.1 751 71.5 84.0 | Symbols: | Ribonuclease III family protein | chr4:17626259-17628854 REVERSE LENGTH=537
Medicago Medtr4g095410.1 771 73.4 83.2 | ribonuclease III domain protein | HC | chr4:39773237-39768149 | 20130731
Soybean Glyma01g39960.1 779 72.2 82.7  
LJGI gnl|LJGI|TC61205 696 83.2 83.2 similar to UniRef100_A7PLN1 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0186219.1 length: 538 aa.
IPR000999 Ribonuclease III domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004525 ribonuclease III activity    
Biological Process GO:0006396 RNA processing    
Gene3D G3DSA:1.10.1520.10 no description 4.3e-11 171-297
403-528
HMMPfam PF00636 Ribonuclease_3 0.00079 423-492
HMMSmart SM00535 Ribonuclease 2.5e-23 171-306
ProfileScan PS50142 RNASE_3_2 15.234 172-285
superfamily SSF69065 RNase 5.7e-14 131-311
361-529
IPR011907 Ribonuclease III
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004525 ribonuclease III activity    
Biological Process GO:0016075 rRNA catabolic process    
HMMPanther PTHR11207 RIBONUCLEASE 2e-103 43-536
no_ID  
Seg seg seg NA 77-90
Putative transmembrane regions
  From To
TM segments
SOSUI		 265 287
Wolf-PSORT
Lj0g3v0186219.1	nucl 5.5, cyto 5, cysk_nucl 3.5, mito 1, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0186219.1