Miyakogusa Predicted Gene
- Lj0g3v0183649.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|TC75314 |
65.9 |
95.1 |
95.1 |
similar to UniRef100_Q0DEL4 Cluster: Os06g0146500 protein; n=1; Oryza sativa Japonica Group|Rep: Os06g0146500 protein - Oryza sativa subsp. japonica (Rice), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0183649.1 |
length: 204 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
47-55 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
25 |
47 |
| 101 |
123 |
| 150 |
170 |
- Wolf-PSORT
Lj0g3v0183649.1 cyto 4.5, vacu 4, cyto_nucl 3.5, plas 2, nucl 1.5, E.R._plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0183649.1 |
|