Miyakogusa Predicted Gene
- Lj0g3v0178779.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KDY5_MEDTR |
213 |
49.3 |
65.6 |
(tr|G7KDY5) Disease resistance-like protein OS=Medicago truncatula GN=MTR_5g040440 PE=4 SV=1 |
| TAIR_pep |
AT5G17680.1 |
131 |
34.1 |
53.8 |
| Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294 |
| Medicago |
Medtr5g040440.1 |
214 |
49.3 |
65.6 |
| TIR-NBS-LRR class disease resistance protein | HC | chr5:17784495-17786893 | 20130731 |
| Soybean |
Glyma01g05710.1 |
203 |
47.9 |
64.2 |
|
| LJGI |
gnl|LJGI|DC595211 |
220 |
100.0 |
100.0 |
weakly similar to UniRef100_Q8RYA9 Cluster: Resistance protein nbs-lrr; n=1; Vigna unguiculata|Rep: Resistance protein nbs-lrr - Vigna unguiculata (Cowpea), partial (46%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0178779.1 |
length: 237 aa. |
| IPR002182 |
NB-ARC |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0043531 |
ADP binding |
|
|
| HMMPfam |
PF00931 |
NB-ARC |
2.3e-08 |
2-80 |
| no_ID |
|
| HMMPanther |
PTHR11017 |
LEUCINE-RICH |
2e-30 |
1-216 |
| HMMPanther |
PTHR11017:SF130DISEASE |
RESISTANCE |
2e-30 |
1-216 |
| superfamily |
SSF46785 |
"Winged |
1.6e-15 |
46-153 |
- Wolf-PSORT
Lj0g3v0178779.1 extr 9, cyto 2, chlo 1, nucl 1, golg 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0178779.1 |
|