Miyakogusa Predicted Gene

Lj0g3v0178359.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J6Y7_MEDTR 555 67.1 72.6 (tr|G7J6Y7) Protein ssh4 OS=Medicago truncatula GN=MTR_3g102120 PE=4 SV=1
TAIR_pep AT4G06536.1 180 54.5 70.1 | Symbols: | SPla/RYanodine receptor (SPRY) domain-containing protein | chr4:3360746-3361255 FORWARD LENGTH=169
Medicago Medtr3g102120.1 555 67.1 72.6 | SPla/RYanodine receptor (SPRY) domain protein | HC | chr3:47047102-47049760 | 20130731
Soybean Glyma06g04510.1 483 63.0 68.7  
LJGI gnl|LJGI|TC60844 1800 99.9 99.9 similar to UniRef100_A7NU02 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0178359.1 length: 482 aa.
IPR003877 SPla/RYanodine receptor SPRY
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00622 SPRY 1.1e-06 295-389
IPR008985 Concanavalin A-like lectin/glucanases superfamily
superfamily SSF49899 Concanavalin 8.3e-09 286-395
no_ID  
Seg seg seg NA 9-25
107-125
170-179
217-233
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
Wolf-PSORT
Lj0g3v0178359.1	chlo 12, nucl 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0178359.1