Miyakogusa Predicted Gene

Lj0g3v0174949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LXI6_SOYBN 672 71.6 82.6 (tr|I1LXI6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G21065.1 366 43.4 62.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11245976-11247763 FORWARD LENGTH=595
Medicago Medtr3g005330.1 663 70.2 80.7 | PPR containing plant-like protein | HC | chr3:156847-154639 | 20130731
Soybean Glyma13g10430.2 672 71.6 82.6  
LJGI gnl|LJGI|TC70473 597 100.0 100.0 weakly similar to UniRef100_A7PDK1 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0174949.1 length: 454 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.032 334-358
HMMPfam PF13041 PPR_2 2.6e-08 52-99
155-202
257-305
HMMTigr TIGR00756 PPR: 3.3e-06 56-81
130-158
158-191
260-294
ProfileScan PS51375 PPR 6.960 53-87
156-190
125-155
90-124
258-292
227-257
330-360
294-324
362-392
396-430
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9.3e-13 362-415
no_ID  
HMMPanther PTHR24015 FAMILY 8.7e-169 1-438
HMMPanther PTHR24015:SF61 PGR3 8.7e-169 1-438
superfamily SSF48452 TPR-like 0.00023 27-182
244-415
Wolf-PSORT
Lj0g3v0174949.1	plas 8.5, cyto_plas 5.5, E.R. 3, cyto 1.5, E.R._vacu 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0174949.1