Miyakogusa Predicted Gene

Lj0g3v0171659.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MKK7_SOYBN 252 48.4 55.2 (tr|K7MKK7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G08139.1 157 39.3 52.8 | Symbols: | RING/U-box superfamily protein | chr5:2616487-2617617 FORWARD LENGTH=376
Medicago Medtr4g110100.1 228 70.9 80.8 | zinc finger, C3HC4 type (RING finger) protein | HC | chr4:45852019-45853843 | 20130731
Soybean Glyma17g09000.1 242 47.7 55.3  
LJGI gnl|LJGI|TC68621 948 96.0 96.0 similar to UniRef100_A7PGH2 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0171659.1 length: 384 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.2e-13 321-362
HMMSmart SM00184 Ring 3.7e-07 321-361
ProfileScan PS50089 ZF_RING_2 11.811 321-362
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.1e-16 317-366
no_ID  
HMMPanther PTHR22763 RING 2.8e-47 254-376
HMMPanther PTHR22763:SF0 SUBFAMILY 2.8e-47 254-376
Seg seg seg NA 25-42
43-52
95-113
183-196
202-214
217-231
superfamily SSF57850 RING/U-box 4.3e-21 300-368
Wolf-PSORT
Lj0g3v0171659.1	cyto 6, nucl 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0171659.1