Miyakogusa Predicted Gene

Lj0g3v0170279.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L8N9_MEDTR 208 75.0 81.1 (tr|G7L8N9) Ring finger protein OS=Medicago truncatula GN=MTR_8g073120 PE=4 SV=1
TAIR_pep AT1G76410.1 162 59.9 69.7 | Symbols: ATL8 | RING/U-box superfamily protein | chr1:28668915-28669472 FORWARD LENGTH=185
Medicago Medtr8g073120.1 208 75.0 81.1 | anaphase-promoting complex subunit 11 RING-H2 finger protein | HC | chr8:30903061-30902070 | 20130731
Soybean Glyma11g09280.1 201 67.5 78.8  
LJGI gnl|LJGI|TC79521 658 99.7 99.7 similar to UniRef100_A7PKU8 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0170279.1 length: 170 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.8e-17 105-149
HMMSmart SM00184 Ring 1.1e-07 106-147
ProfileScan PS50089 ZF_RING_2 12.416 106-148
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 9.2e-19 104-151
no_ID  
HMMPanther PTHR22764 RING 2.8e-53 27-148
HMMPanther PTHR22764:SF18 ZINC 2.8e-53 27-148
Seg seg seg NA 149-170
superfamily SSF57850 RING/U-box 9.5e-21 76-154
Putative transmembrane regions
  From To
TM segments
SOSUI		 30 52
Wolf-PSORT
Lj0g3v0170279.1	chlo 11, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0170279.1