Miyakogusa Predicted Gene
- Lj0g3v0161729.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
| TrEMBL |
K7L087_SOYBN |
283 |
83.3 |
92.9 |
(tr|K7L087) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G26130.1 |
149 |
45.9 |
59.9 |
| Symbols: | Cellulase (glycosyl hydrolase family 5) protein | chr3:9553708-9555611 REVERSE LENGTH=551 |
| Medicago |
Medtr8g028430.1 |
289 |
85.9 |
92.9 |
| hydrolyzing O-glycosyl compounds hydrolase | HC | chr8:10763967-10766565 | 20130731 |
| Soybean |
Glyma07g08060.1 |
282 |
83.3 |
92.9 |
|
| LJGI |
gnl|LJGI|GO025078 |
135 |
94.3 |
94.3 |
similar to UniRef100_Q2HTU0 Cluster: Glycoside hydrolase, family 5; Ricin B-related lectin; n=1; Medicago truncatula|Rep: Glycoside hydrolase, family 5; Ricin B-related lectin - Medicago truncatula (Barrel medic), partial (14%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0161729.1 |
length: 156 aa. |
| IPR001547 |
Glycoside hydrolase, family 5 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF00150 |
Cellulase |
3.9e-08 |
3-154 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
5e-21 |
2-156 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
8.4e-16 |
1-154 |
| no_ID |
|
| HMMPanther |
PTHR31263 |
FAMILY |
6.1e-32 |
1-155 |
| HMMPanther |
PTHR31263:SF0 |
SUBFAMILY |
6.1e-32 |
1-155 |
- Wolf-PSORT
Lj0g3v0161729.1 nucl 10, cyto 2, mito 1, plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0161729.1 |
|