Miyakogusa Predicted Gene
- Lj0g3v0158249.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T096_LOTJA |
188 |
97.8 |
98.9 |
(tr|I3T096) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G11280.1 |
142 |
70.7 |
87.0 |
| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:3597321-3598347 FORWARD LENGTH=209 |
| Medicago |
Medtr3g107550.2 |
155 |
75.0 |
91.3 |
| transmembrane protein, putative | HC | chr3:49605125-49607081 | 20130731 |
| Soybean |
Glyma06g07340.1 |
164 |
84.8 |
92.4 |
|
| LJGI |
gnl|LJGI|TC63594 |
718 |
99.2 |
99.2 |
similar to UniRef100_A7P5Q3 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0158249.1 |
length: 130 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
3-30 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
26 |
48 |
| 69 |
91 |
- Wolf-PSORT
Lj0g3v0158249.1 mito 8, chlo 3, cyto 1, plas 1, E.R. 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0158249.1 |
|