Miyakogusa Predicted Gene

Lj0g3v0157459.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M851_SOYBN 1131 66.5 74.2 (tr|I1M851) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G48670.2 343 49.1 67.2 | Symbols: IDN2, RDM12 | XH/XS domain-containing protein | chr3:18031240-18033615 FORWARD LENGTH=647
Medicago Medtr5g079940.2 1102 65.1 75.5 | XH/XS domain protein | HC | chr5:34197983-34205199 | 20130731
Soybean Glyma14g07370.1 1092 66.7 74.3  
LJGI gnl|LJGI|FS320616 634 100.0 100.0 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0157459.1 length: 844 aa.
IPR005380 XS domain
method AccNumber shortName E-value location
HMMPfam PF03468 XS 7.2e-39 575-691
IPR005381 Zinc finger-XS domain
HMMPfam PF03470 zf-XS 2.1e-15 45-87
155-197
271-314
388-432
506-547
no_ID  
HMMPanther PTHR21596 RIBONUCLEASE 1.3e-122 465-821
HMMPanther PTHR21596:SF3 TRANSCRIPTION 1.3e-122 465-821
Seg seg seg NA 179-191
827-834
Putative transmembrane regions
  From To
TM segments
SOSUI		 819 841
Wolf-PSORT
Lj0g3v0157459.1	nucl 11, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0157459.1