Miyakogusa Predicted Gene

Lj0g3v0146999.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JSP8_SOYBN 135 70.5 80.0 (tr|I1JSP8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G49310.1 55.8 43.2 59.5 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; Has 11 Blast hits to 11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:18237997-18238325 REVERSE LENGTH=82

Medicago Medtr4g069770.1 116 62.6 75.8 | DUF2775 family protein | HC | chr4:26235941-26235532 | 20130731

Soybean Glyma04g01490.1 135 70.5 80.0

LJGI gnl|LJGI|TC68254 545 99.6 99.6 similar to UniRef100_Q9FUP6 Cluster: Suspensor-specific protein; n=1; Phaseolus coccineus|Rep: Suspensor-specific protein - Phaseolus coccineus (Scarlet runner bean), partial (28%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0146999.1 length: 91 aa.

IPR024489 Organ specific protein

method AccNumber shortName E-value location

HMMPfam PF10950 DUF2775 8.2e-07 25-80

Putative transmembrane regions

From To

TM segments
SOSUI 4 26

Wolf-PSORT

Lj0g3v0146999.1 extr 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0146999.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JSP8_SOYBN	135	70.5	80.0	(tr\|I1JSP8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G49310.1	55.8	43.2	59.5	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; Has 11 Blast hits to 11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:18237997-18238325 REVERSE LENGTH=82
Medicago	Medtr4g069770.1	116	62.6	75.8	\| DUF2775 family protein \| HC \| chr4:26235941-26235532 \| 20130731
Soybean	Glyma04g01490.1	135	70.5	80.0
LJGI	gnl\|LJGI\|TC68254	545	99.6	99.6	similar to UniRef100_Q9FUP6 Cluster: Suspensor-specific protein; n=1; Phaseolus coccineus\|Rep: Suspensor-specific protein - Phaseolus coccineus (Scarlet runner bean), partial (28%)

IPR024489	Organ specific protein
Lj0g3v0146999.1				length: 91 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF10950	DUF2775	8.2e-07	25-80