Miyakogusa Predicted Gene

Lj0g3v0145439.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IYW1_MEDTR 857 87.4 91.2 (tr|G7IYW1) Uridine 5'-monophosphate synthase OS=Medicago truncatula GN=MTR_3g017580 PE=3 SV=1
TAIR_pep AT3G54470.1 708 73.1 83.2 | Symbols: | uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) | chr3:20168285-20170245 REVERSE LENGTH=476
Medicago Medtr3g017580.2 857 87.4 91.2 | uridine 5-monophosphate synthase-like protein | HC | chr3:5031496-5035622 | 20130731
Soybean Glyma11g21530.2 843 86.4 89.7  
LJGI gnl|LJGI|TC62289 1800 99.8 99.8 similar to UniRef100_Q1RU71 Cluster: Phosphoribosyltransferase; Orotidine 5-phosphate decarboxylase; n=1; Medicago truncatula|Rep: Phosphoribosyltransferase; Orotidine 5-phosphate decarboxylase - Medicago truncatula (Barrel medic), partial (77%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0145439.1 length: 478 aa.
IPR000836 Phosphoribosyltransferase domain
method AccNumber shortName E-value location
Biological Process GO:0009116 nucleoside metabolic process    
HMMPfam PF00156 Pribosyltran 4.5e-10 44-150
IPR001754 Orotidine 5'-phosphate decarboxylase domain
Molecular Function GO:0004590 orotidine-5'-phosphate decarboxylase activity    
Biological Process GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process    
HMMPfam PF00215 OMPdecase 2.2e-74 246-465
HMMSmart SM00934 Orotidine 2e-31 247-465
IPR004467 Orotate phosphoribosyl transferase domain
HMMTigr TIGR00336 pyrE: 2.3e-42 14-175
IPR011060 Ribulose-phosphate binding barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF51366 Ribulose-phoshate 6.1e-54 217-474
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 2.1e-100 218-477
IPR014732 Orotidine 5'-phosphate decarboxylase
Molecular Function GO:0004590 orotidine-5'-phosphate decarboxylase activity    
Biological Process GO:0044205 'de novo' UMP biosynthetic process    
HMMTigr TIGR01740 pyrF: 1.2e-52 248-466
IPR018089 Orotidine 5'-phosphate decarboxylase, active site
Molecular Function GO:0004590 orotidine-5'-phosphate decarboxylase activity    
Biological Process GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process    
PatternScan PS00156 OMPDECASE NA 303-316
IPR023031 Orotate phosphoribosyltransferase
Molecular Function GO:0004588 orotate phosphoribosyltransferase activity    
Biological Process GO:0006221 pyrimidine nucleotide biosynthetic process    
HAMAP MF_01208 PyrE 22.783 1-231
no_ID  
Gene3D G3DSA:3.40.50.2020 no description 5.6e-55 5-177
HMMPanther PTHR32557 OROTIDINE 1.4e-263 1-478
HMMPanther PTHR32557:SF0 OROTIDINE 1.4e-263 1-478
Seg seg seg NA 51-64
347-362
superfamily SSF53271 PRTase-like 4.9e-45 1-189
Wolf-PSORT
Lj0g3v0145439.1	chlo 7, cyto 3, plas 1, extr 1, pero 1, golg 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0145439.1