Miyakogusa Predicted Gene

Lj0g3v0139989.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KX60_SOYBN 1195 88.5 94.3 (tr|I1KX60) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT4G15560.1 941 75.9 87.1 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | Deoxyxylulose-5-phosphate synthase | chr4:8884218-8887254 FORWARD LENGTH=717
Medicago Medtr8g068265.1 1161 86.3 93.2 | 1-deoxy-D-xylulose-5-phosphate synthase | HC | chr8:28466086-28471025 | 20130731
Soybean Glyma08g37670.1 1155 86.3 91.9  
LJGI gnl|LJGI|TC58045 1600 100.0 100.0 homologue to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor; n=1; Medicago truncatula|Rep: 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor - Medicago truncatula (Barrel medic), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0139989.1 length: 644 aa.
IPR005474 Transketolase, N-terminal
method AccNumber shortName E-value location
PatternScan PS00801 TRANSKETOLASE_1 NA 97-116
IPR005475 Transketolase-like, pyrimidine-binding domain
HMMPfam PF02779 Transket_pyr 1.1e-41 393-555
HMMSmart SM00861 Transketolase, 7.1e-68 394-559
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 1.8e-19 573-643
IPR005477 Deoxyxylulose-5-phosphate synthase
Molecular Function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity    
Biological Process GO:0016114 terpenoid biosynthetic process    
HAMAP MF_00315 DXP_synth 37.404 71-642
HMMPfam PF13292 DXP_synthase_N 6.4e-108 72-357
HMMTigr TIGR00204 dxs: 2.3e-220 74-642
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 1.5e-22 567-643
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 2.9e-20 574-643
IPR020826 Transketolase binding site
PatternScan PS00802 TRANSKETOLASE_2 NA 500-516
no_ID  
Gene3D G3DSA:3.40.50.970 no description 4.1e-36 314-407
408-573
HMMPanther PTHR11624 DEHYDROGENASE 8e-294 75-643
HMMPanther PTHR11624:SF20 1-DEOXYXYLULOSE-5-PHOSPHATE 8e-294 75-643
superfamily SSF52518 Thiamin 4.2e-65 69-456
390-583
Wolf-PSORT
Lj0g3v0139989.1	pero 7, chlo 5, cyto 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0139989.1