Miyakogusa Predicted Gene

Lj0g3v0133179.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MEZ0_SOYBN 211 64.1 73.1 (tr|K7MEZ0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G46160.1 187 57.5 63.7 | Symbols: | RING/U-box superfamily protein | chr2:18963109-18963753 FORWARD LENGTH=214
Medicago Medtr8g028465.1 201 64.2 70.9 | zinc finger, C3HC4 type (RING finger) protein | HC | chr8:10810848-10810018 | 20130731
Soybean Glyma16g03430.1 212 64.1 73.1  
LJGI gnl|LJGI|BP055954 728 99.5 99.5 similar to UniRef100_Q2HV66 Cluster: Zinc finger, RING-type; n=1; Medicago truncatula|Rep: Zinc finger, RING-type - Medicago truncatula (Barrel medic), partial (64%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0133179.1 length: 180 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 2.1e-12 114-158
HMMSmart SM00184 Ring 0.00013 115-156
ProfileScan PS50089 ZF_RING_2 12.135 115-157
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 7e-16 112-158
no_ID  
HMMPanther PTHR14155 RING 2.6e-59 26-180
HMMPanther PTHR14155:SF15 RING 2.6e-59 26-180
Seg seg seg NA 2-22
36-51
superfamily SSF57850 RING/U-box 2.8e-18 88-163
Putative transmembrane regions
  From To
TM segments
SOSUI		 31 53
Wolf-PSORT
Lj0g3v0133179.1	chlo 11, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0133179.1