Miyakogusa Predicted Gene

Lj0g3v0126969.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KK50_MEDTR 196 94.8 99.0 (tr|G7KK50) Alanyl-tRNA synthetase (Fragment) OS=Medicago truncatula GN=MTR_6g045600 PE=3 SV=1
TAIR_pep AT1G50200.2 191 90.7 96.9 | Symbols: ALATS | Alanyl-tRNA synthetase | chr1:18591429-18598167 REVERSE LENGTH=963
Medicago Medtr4g074640.1 196 94.8 99.0 | alanine-tRNA ligase | HC | chr4:28430949-28445218 | 20130731
Soybean Glyma11g10860.1 195 95.9 97.9  
LJGI gnl|LJGI|TC79511 224 96.9 96.9 similar to UniRef100_P36428 Cluster: Alanyl-tRNA synthetase, mitochondrial precursor; n=2; Arabidopsis thaliana|Rep: Alanyl-tRNA synthetase, mitochondrial precursor - Arabidopsis thaliana (Mouse-ear cress), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0126969.1 length: 97 aa.
IPR002318 Alanine-tRNA ligase, class IIc
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Cellular Component GO:0005737 cytoplasm    
FPrintScan PR00980 TRNASYNTHALA 5.6e-13 55-71
79-92
HMMPanther PTHR11777:SF6 SUBFAMILY 1.1e-60 1-97
IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004813 alanine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006419 alanyl-tRNA aminoacylation    
superfamily SSF101353 Putative 5.1e-26 18-95
IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004813 alanine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006419 alanyl-tRNA aminoacylation    
HMMPfam PF01411 tRNA-synt_2c 1.3e-35 1-96
IPR018165 Alanyl-tRNA synthetase, class IIc, core domain
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004813 alanine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006419 alanyl-tRNA aminoacylation    
ProfileScan PS50860 AA_TRNA_LIGASE_II_ALA 19.505 1-97
no_ID  
HMMPanther PTHR11777 ALANYL-TRNA 1.1e-60 1-97
Wolf-PSORT
Lj0g3v0126969.1	cyto 9, chlo 3, pero 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0126969.1