Miyakogusa Predicted Gene

Lj0g3v0122299.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M3S8_SOYBN 480 69.6 83.3 (tr|K7M3S8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G02650.1 359 52.3 71.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:568135-569865 FORWARD LENGTH=576
Medicago Medtr3g081310.1 480 69.3 82.7 | PPR containing plant protein | HC | chr3:36828718-36830894 | 20130731
Soybean Glyma13g43320.1 480 69.6 83.3  
LJGI gnl|LJGI|TC71507 1124 90.0 90.0 weakly similar to UniRef100_A7R293 Cluster: Chromosome undetermined scaffold_409, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_409, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0122299.1 length: 337 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.97 5-28
148-172
HMMPfam PF13041 PPR_2 1.4e-10 178-223
248-293
HMMTigr TIGR00756 PPR: 4.4e-09 179-212
248-281
ProfileScan PS51375 PPR 8.955 1-34
35-69
70-104
176-210
141-175
211-245
246-280
281-316
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.5e-09 213-271
no_ID  
HMMPanther PTHR24015 FAMILY 6e-55 4-314
HMMPanther PTHR24015:SF0 SUBFAMILY 6e-55 4-314
superfamily SSF81901 HCP-like 9.4e-09 38-279
Wolf-PSORT
Lj0g3v0122299.1	cyto 11, pero 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0122299.1