Miyakogusa Predicted Gene

Lj0g3v0111259.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M2A8_SOYBN 695 74.8 81.1 (tr|K7M2A8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G23550.1 514 59.4 71.0 | Symbols: | MATE efflux family protein | chr3:8448435-8450649 REVERSE LENGTH=469
Medicago Medtr2g078960.1 703 75.2 80.0 | MATE efflux family protein | HC | chr2:33059916-33064979 | 20130731
Soybean Glyma13g35060.1 695 74.8 81.1  
LJGI gnl|LJGI|TC77022 1415 99.5 99.5 weakly similar to UniRef100_A7P1Q5 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0111259.1 length: 489 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 1.8e-33 51-210
272-434
HMMTigr TIGR00797 matE: 5.3e-73 51-448
no_ID  
HMMPanther PTHR11206 MULTIDRUG 4.7e-204 22-473
HMMPanther PTHR11206:SF21 MATE 4.7e-204 22-473
Seg seg seg NA 18-30
126-140
189-206
Putative transmembrane regions
  From To
TM segments
SOSUI		 15 37
48 70
86 108
125 147
160 182
191 213
221 243
269 291
302 324
344 366
383 405
418 440
447 468
Wolf-PSORT
Lj0g3v0111259.1	extr 4, chlo 3, E.R. 3, cyto 2, E.R._vacu 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0111259.1