Miyakogusa Predicted Gene
- Lj0g3v0109499.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T8R8_LOTJA |
99.0 |
100.0 |
100.0 |
(tr|I3T8R8) Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT5G48570.1 |
72.4 |
86.5 |
86.5 |
| Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr5:19690746-19693656 REVERSE LENGTH=578 |
| Medicago |
Medtr7g053470.1 |
70.1 |
83.8 |
86.5 |
| FKBP-type peptidyl-prolyl cis-trans isomerase | HC | chr7:18851017-18844062 | 20130731 |
| Soybean |
Glyma16g10730.2 |
74.7 |
89.2 |
89.2 |
|
| LJGI |
gnl|LJGI|TC62393 |
266 |
100.0 |
100.0 |
similar to UniRef100_Q43207 Cluster: 70 kDa peptidyl-prolyl isomerase; n=1; Triticum aestivum|Rep: 70 kDa peptidyl-prolyl isomerase - Triticum aestivum (Wheat), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0109499.1 |
length: 45 aa. |
| IPR001179 |
Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006457 |
protein folding |
|
|
| HMMPfam |
PF00254 |
FKBP_C |
1.8e-09 |
9-45 |
| ProfileScan |
PS50059 |
FKBP_PPIASE |
13.732 |
11-45 |
| IPR023566 |
Peptidyl-prolyl cis-trans isomerase, FKBP-type |
| HMMPanther |
PTHR10516 |
PEPTIDYL-PROLYL |
1.3e-18 |
9-45 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.50.40 |
no description |
2.2e-14 |
8-45 |
| HMMPanther |
PTHR10516:SF66 |
PEPTIDYL-PROLYL |
1.3e-18 |
9-45 |
| superfamily |
SSF54534 |
FKBP-like |
1.3e-09 |
6-44 |
- Wolf-PSORT
Lj0g3v0109499.1 nucl 5, mito 5, chlo 1, cyto 1, plas 1, extr 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0109499.1 |
|