Miyakogusa Predicted Gene

Lj0g3v0101259.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A2Q643_MEDTR 543 77.0 84.6 (tr|A2Q643) Major facilitator superfamily OS=Medicago truncatula GN=MTR_2g081930 PE=4 SV=1
TAIR_pep AT3G20660.1 430 63.8 76.1 | Symbols: AtOCT4, 4-Oct | organic cation/carnitine transporter4 | chr3:7225271-7228510 REVERSE LENGTH=526
Medicago Medtr2g081930.1 543 77.0 84.6 | organic cation/carnitine transporter | HC | chr2:34422730-34417907 | 20130731
Soybean Glyma13g36070.1 525 74.4 83.4  
LJGI gnl|LJGI|TC71119 2123 100.0 100.0 similar to UniRef100_A2Q643 Cluster: Major facilitator superfamily; n=1; Medicago truncatula|Rep: Major facilitator superfamily - Medicago truncatula (Barrel medic), partial (92%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0101259.1 length: 356 aa.
IPR005828 General substrate transporter
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0022857 transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00083 Sugar_tr 1.7e-22 4-347
IPR005829 Sugar transporter, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
PatternScan PS00216 SUGAR_TRANSPORT_1 NA 218-234
PatternScan PS00217 SUGAR_TRANSPORT_2 NA 14-39
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 1.1e-34 1-346
IPR020846 Major facilitator superfamily domain
ProfileScan PS50850 MFS 18.417 1-341
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 1.6e-10 2-95
176-338
HMMPanther PTHR24064 FAMILY 1.9e-194 1-347
HMMPanther PTHR24064:SF105SUBFAMILY NOT 1.9e-194 1-347
Seg seg seg NA 9-24
Putative transmembrane regions
  From To
TM segments
SOSUI		 8 30
43 65
70 92
163 185
200 222
229 251
259 281
307 329
Wolf-PSORT
Lj0g3v0101259.1	chlo 4, plas 3, E.R. 2.5, chlo_mito 2.5, golg_plas 2.5, E.R._vacu 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0101259.1