Miyakogusa Predicted Gene

Lj0g3v0091599.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MPT8_SOYBN 413 89.4 95.2 (tr|I1MPT8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G05190.1 367 80.2 89.0 | Symbols: emb2394 | Ribosomal protein L6 family | chr1:1502515-1503738 REVERSE LENGTH=223
Medicago Medtr0316s0010.1 294 85.9 94.5 | 50S ribosomal protein L6 | HC | scaffold0316:15557-13192 | 20130731
Soybean Glyma16g31250.1 413 89.4 95.2  
LJGI gnl|LJGI|TC57585 1354 99.9 99.9 similar to UniRef100_A9SYQ3 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (75%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0091599.1 length: 227 aa.
IPR000702 Ribosomal protein L6
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Molecular Function GO:0019843 rRNA binding    
HMMPanther PTHR11655 60S/50S 7.8e-119 46-227
IPR002358 Ribosomal protein L6, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00525 RIBOSOMAL_L6_1 NA 201-209
IPR019906 Ribosomal protein L6, bacterial-type
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Molecular Function GO:0019843 rRNA binding    
FPrintScan PR00059 RIBOSOMALL6 7.9e-34 118-143
146-162
188-209
HMMTigr TIGR03654 L6_bact: 1e-69 48-223
IPR020040 Ribosomal protein L6, alpha-beta domain
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Molecular Function GO:0019843 rRNA binding    
Gene3D G3DSA:3.90.930.12 no description 5.1e-40 48-129
130-224
HMMPfam PF00347 Ribosomal_L6 2.4e-22 57-129
137-211
superfamily SSF56053 Ribosomal 2.4e-17 130-218
51-129
no_ID  
HMMPanther PTHR11655:SF8 SUBFAMILY 7.8e-119 46-227
Wolf-PSORT
Lj0g3v0091599.1	cyto 9, chlo 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0091599.1