Miyakogusa Predicted Gene

Lj0g3v0089719.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7JH38_MEDTR 811 71.3 83.0 (tr|G7JH38) Ubiquitin and WLM domain-containing protein OS=Medicago truncatula GN=MTR_4g027090 PE=4 SV=1
TAIR_pep AT5G35690.1 437 61.3 79.4 | Symbols: | CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G55915.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:13865027-13868117 REVERSE LENGTH=603
Medicago Medtr3g082840.1 766 68.6 80.0 | zinc metalloproteinase-like protein, putative | HC | chr3:37388603-37394906 | 20130731
Soybean Glyma20g14390.1 739 67.7 76.4  
LJGI gnl|LJGI|TC57834 1639 100.0 100.0 similar to UniRef100_A7PXB7 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0089719.1 length: 596 aa.
IPR013536 WLM
method AccNumber shortName E-value location
HMMPfam PF08325 WLM 6.6e-39 198-364
ProfileScan PS51397 WLM 37.627 176-368
no_ID  
Coil coil coiled-coil NA 147-168
Gene3D G3DSA:3.10.20.90 no description 9e-07 50-143
HMMPanther PTHR23153 UBX-RELATED 6e-102 50-595
HMMPanther PTHR23153:SF2 UBX-RELATED 6e-102 50-595
Seg seg seg NA 19-29
530-538
Wolf-PSORT
Lj0g3v0089719.1	cyto 6, nucl 4, chlo 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0089719.1