Miyakogusa Predicted Gene
- Lj0g3v0088129.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SXF4_LOTJA |
84.0 |
89.1 |
89.1 |
(tr|I3SXF4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G67250.1 |
56.6 |
65.8 |
81.6 |
| Symbols: | Proteasome maturation factor UMP1 | chr1:25163808-25164967 REVERSE LENGTH=141 |
| Medicago |
Medtr4g077240.1 |
72.4 |
79.5 |
84.1 |
| proteasome maturation factor UMP1 family protein | HC | chr4:29591414-29595778 | 20130731 |
| Soybean |
Glyma12g02180.1 |
65.9 |
78.9 |
89.5 |
|
| LJGI |
gnl|LJGI|GO041710 |
220 |
96.2 |
96.2 |
similar to UniRef100_A7PAL6 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0088129.1 |
length: 56 aa. |
| IPR008012 |
Proteasome maturation factor UMP1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05348 |
UMP1 |
9.3e-05 |
11-47 |
- Wolf-PSORT
Lj0g3v0088129.1 nucl 4, chlo 3, cyto 3, mito 1, extr 1, E.R. 1, cysk 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0088129.1 |
|