Miyakogusa Predicted Gene

Lj0g3v0086919.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S0Y6_LOTJA 493 83.8 84.1 (tr|I3S0Y6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G28140.1 305 60.2 73.5 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:9833029-9834390 REVERSE LENGTH=280
Medicago Medtr1g099520.1 333 64.5 72.1 | integral membrane protein | HC | chr1:44953746-44951120 | 20130731
Soybean Glyma20g39400.1 363 70.1 74.9  
LJGI gnl|LJGI|TC62454 1758 99.9 99.9 similar to UniRef100_A7QT82 Cluster: Chromosome chr1 scaffold_166, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_166, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0086919.1 length: 296 aa.
IPR019275 Protein of unknown function DUF2301
method AccNumber shortName E-value location
HMMPfam PF10063 DUF2301 4.2e-45 137-275
no_ID  
Seg seg seg NA 9-24
97-108
124-141
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
89 111
125 147
153 175
189 211
213 235
237 256
Wolf-PSORT
Lj0g3v0086919.1	chlo 7, plas 5, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0086919.1