Miyakogusa Predicted Gene

Lj0g3v0086209.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KH54_SOYBN 310 69.0 78.2 (tr|I1KH54) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G15520.1 259 57.4 69.4 | Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423
Medicago Medtr4g011640.1 312 69.0 78.7 | drug resistance transporter-like ABC domain protein | HC | chr4:2903046-2892454 | 20130731
Soybean Glyma07g03780.1 301 76.1 87.0  
LJGI gnl|LJGI|TC80265 492 89.9 89.9 weakly similar to UniRef100_A7P7L7 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0086209.1 length: 216 aa.
IPR013525 ABC-2 type transporter
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
HMMPfam PF01061 ABC2_membrane 2.8e-37 1-157
no_ID  
HMMPanther PTHR19241 ATP-BINDING 1.5e-120 1-216
HMMPanther PTHR19241:SF10 ATP-BINDING 1.5e-120 1-216
Seg seg seg NA 77-86
185-206
Putative transmembrane regions
  From To
TM segments
SOSUI		 4 26
44 66
73 95
108 129
184 206
Wolf-PSORT
Lj0g3v0086209.1	extr 7, cyto 4, E.R. 2, cyto_nucl 2, cyto_pero 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0086209.1